Mgr. David Čechák

2025

• miRBench: novel benchmark datasets for microRNA binding site prediction that mitigate against prevalent microRNA frequency class bias

  SAMMUT Stephanie GREŠOVÁ Katarína TZIMOTOUDIS Dimosthenis MARŠÁLKOVÁ Eva ČECHÁK David ALEXIOU Panagiotis

  Article in Periodical

  Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference, year: 2025, volume: 41, DOI

2023

• Genomic benchmarks: a collection of datasets for genomic sequence classification

  GREŠOVÁ Katarína MARTINEK Vlastimil ČECHÁK David ŠIMEČEK Petr ALEXIOU Panagiotis

  Article in Periodical

  BMC Genomic Data, year: 2023, volume: 24, edition: 1, DOI

• RBP-Tar – a searchable database for experimental RBP binding sites

  GREŠOVÁ Katarína RAČEK Tomáš MARTINEK Vlastimil ČECHÁK David SVOBODOVÁ Radka ALEXIOU Panagiotis

  Article in Periodical

  F1000Research, year: 2023, volume: 12, edition: 755, DOI

2022

• Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification

  GREŠOVÁ Katarína ŠIMEČEK Petr MARTINEK Vlastimil ČECHÁK David ALEXIOU Panagiotis

  Conference abstract

  Year: 2022, type: Conference abstract